IMR Press / FBL / Volume 28 / Issue 8 / DOI: 10.31083/j.fbl2808191
Open Access Original Research
Satellite III (1q12) Copy Number Variation in Cultured Human Skin Fibroblasts from Schizophrenic Patients and Healthy Controls
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1 Laboratory of Molecular Biology, Research Centre for Medical Genetics (RCMG), 115478 Moscow, Russia
*Correspondence: med-gen@mail.ru (Lev N. Porokhovnik)
Front. Biosci. (Landmark Ed) 2023, 28(8), 191; https://doi.org/10.31083/j.fbl2808191
Submitted: 19 April 2023 | Revised: 24 June 2023 | Accepted: 14 August 2023 | Published: 31 August 2023
Copyright: © 2023 The Author(s). Published by IMR Press.
This is an open access article under the CC BY 4.0 license.
Abstract

Background: The chromosome 1q12 region harbors the genome’s largest pericentromeric heterochromatin domain that includes tandemly repeated satellite III DNA [SatIII (1)]. Increased SatIII (1) copy numbers have been found in cultured human skin fibroblasts (HSFs) during replicative senescence. The aim of this study was to analyze the variation in SatIII (1) abundance in cultured HSFs at early passages depending on the levels of endogenous and exogenous stress. Methods: We studied 10 HSF cell lines with either high (HSFs from schizophrenic cases, n = 5) or low (HSFs from healthy controls, n = 5) levels of oxidative stress. The levels of endogenous stress were estimated by the amounts of reactive oxygen species, DNA damage markers (8-hydroxy-2-deoxyguanosine, gamma-H2A histone family member X), pro- and antioxidant proteins (NADPH oxidase 4, superoxide dismutase 1, nuclear factor erythroid 2-related factor 2), and proteins that regulate apoptosis and autophagy (B-cell lymphoma 2 [Bcl-2], Bcl-2-associated X protein, light chain 3). SatIII (1) copy numbers were measured using the nonradioactive quantitative hybridization technique. For comparison, the contents of telomeric and ribosomal RNA gene repeats were determined. RNASATIII (1 and 9) were quantified using quantitative Polymerase Chain Reaction (PCR). Results: Increased SatIII (1) contents in DNA from confluent HSFs were positively correlated with increased oxidative stress. Confluent cell cultivation without medium replacement and heat shock induced a decrease of SatIII (1) in DNA in parallel with a decrease in RNASATIII (1) and an increase in RNASATIII (9). Conclusions: During HSF cultivation, cells with increased SatIII (1) content accumulated in the cell pool under conditions of exaggerated oxidative stress. This fraction of cells decreased after the additional impact of exogenous stress. The process seems to be oscillatory.

Keywords
schizophrenia
NADPH oxidase 4
nuclear factor erythroid 2-related factor 2
superoxide dismutase 1
gamma-H2A histone family member X
satellite III
copy number variation
human skin fibroblasts
Funding
FGFF-2022-0007/Ministry of Education and Science of the Russian Federation
Figures
Fig. 1.
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