MicroRNAs are reportedly involved in the pathogenesis of neurodegenerative
diseases, including Parkinson’s disease and multiple system atrophy. We
previously identified 7 differentially expressed microRNAs in Parkinson’s disease
patients and control sera (miR-30c, miR-31, miR-141, miR-146b-5p, miR-181c,
miR-214, and miR-193a-3p). To investigate the expression levels of the 7 serum
microRNAs in Parkinson’s disease and multiple system atrophy, 23 early
Parkinson’s disease patients (who did not take any anti- Parkinson’s disease
drugs), 23 multiple system atrophy patients, and 24 normal controls were
recruited at outpatient visits in this study. The expression levels of the 7
microRNAs in serum were detected using quantitative real-time polymerase chain
reaction. A receiver operating characteristic curve was used to evaluate whether
microRNAs can differentially diagnose Parkinson’s disease and multiple system
atrophy. Clinical scales were used to analyze the correlations between serum
microRNAs and clinical features. The results indicated that miR-214 could
distinguish Parkinson’s disease from the controls, and another 3 microRNAs could
differentiate multiple system atrophy from the controls (miR-141, miR-193a-3p,
and miR-30c). The expression of miR-31, miR-141, miR-181c, miR-193a-3p, and
miR-214 were lower in multiple system atrophy than in Parkinson’s disease (all
P
Parkinson’s disease (PD) is a common chronic progressive neurodegenerative disease in middle-aged
and older people. Its main clinical manifestations are bradykinesia, resting
tremor, myotonia and abnormal posture, and gait (Lee et al., 1993). About 1%
of people over 65 years old suffer from PD. The main pathological features are
selective and progressive degeneration of dopamine (DA) neurons in the substantia
nigra compacta of the midbrain, a significant decrease of DA content in the
striatum, and eosinophilic inclusion bodies–Lewy body in the residual neurons,
which are mainly composed of
Variables | NC (n = 24) | PD (n = 23) | MSA (n = 23) | P -value |
Age, years | 62.8 |
59.3 |
58.7 |
P = 0.11 |
Sex, n | P = 0.08 | |||
Male | 12 (50.0%) | 10 (43.5%) | 9 (39.1%) | |
Female | 12 (50.0%) | 13 (56.5%) | 14 (60.9%) | |
UPDRS-II score | NA | 9.1 |
NA | |
UPDRS-III score | NA | 23.8 |
NA | |
UMSARS-II score | NA | NA | 24.8 |
|
HAMD score | NA | 9.5 |
NA | |
HAMA score | NA | 8.3 |
NA | |
PDSS score | NA | 127.9 |
NA | |
PDNMS score | NA | 7.7 |
NA | |
MOCA score | NA | 21.0 |
NA | |
MMSE score | NA | 25.4 |
NA | |
H-Y stage | NA | 2.1 |
NA | |
Values are expressed as the mean |
Multiple system atrophy (MSA) is a sporadic, adult-onset, and progressive
neurodegenerative disease (Fanciulli et al., 2019). The onset age is about 60
years old, but it also occurs in both young and old age (Batla et al., 2018; Wenning et al., 1997). The clinical manifestation of MSA is complex, which is the
combination of autonomic nerve failure, Parkinson’s disease, and ataxia. The
pathological feature of MSA is the formation of cytoplasmic inclusion bodies
composed of misfolded
Both MSA and PD are caused by pathological aggregation of
MiRNAs are a small cluster of endogenous non-coding single-stranded RNA regulatory molecules with a length of about 20-22 nucleotides, which are encoded by endogenous genes and cannot be transcribed into proteins. They inhibit the translation of target mRNAs or promote mRNAs degradation by binding to the 3’-untranslated region (3’-UTR) of target mRNAs, thus inhibiting the expression of target genes at the post-transcriptional level (Vivekanantham et al., 2015). MiRNAs are highly conservative. Their expression is sequential and tissue-specific. They participate in almost all pathological and physiological processes of mammals and play an important role in the occurrence and development of many diseases (Cao and Zhen, 2018; Hu et al., 2019; Junn et al., 2009; Vishnoi and Rani, 2017). They also play a crucial role in regulating cell proliferation, differentiation, growth, metabolism, stress response, apoptosis, and heterochromatin formation (Kim et al., 2007; Santosh et al., 2009; Tutar, 2015). Post-transcriptional regulation is an important process in the pathogenesis of PD (Dorval et al., 2012; Filipowicz et al., 2008; Hombach and Kretz, 2016; Patop et al., 2019). The role of miRNAs in the pathogenesis of PD has attracted increasing attention from researchers (Chang et al., 2017; Kim et al., 2019; Leggio et al., 2017).
MiRNA expression was monitored by qPCR in PD patients and healthy controls. Eight of 224 pre-miRNAs are highly expressed in the midbrain (Kim et al., 2007). Among them, pre-miR-133b was the most downregulated in the PD group. However, these miRNAs found in human brain tissue cannot be directly used as biomarkers for clinical use, and using brain tissue samples from PD patients to diagnose PD is impossible. Early diagnosis requires not only the identification of disease specificity but also minimally invasive biomarkers.
The low stability of RNA molecules limits their ability to be used as biomarkers. However, serum miRNAs are very stable (Jin et al., 2013). In addition to their high sensitivity and specificity, serum miRNAs are also convenient and inexpensive and have other advantages as biomarkers (Zhou et al., 2012). Geekiyanage et al. (2012) found that some serum miRNAs have similar changes in the brain. Cogswell et al. (2008) found the presence of AD-specific miRNAs in cerebrospinal fluid (CSF), suggesting that some miRNAs produced by the diseased tissue and cells can enter the CSF and then enter the peripheral blood through the circulatory system. The results of these studies provide a basis for serum miRNAs as PD biological markers.
We previously identified 7 differentially expressed miRNAs in PD patient and control sera (miR-30c, miR-31, miR-141, miR-146b-5p, miR-181c, miR-214 and miR-193a-3p), and the levels of these 7 miRNAs in serum were significantly lower in the PD patient group than in the control group (Dong et al., 2016). In this paper, we compare the difference in the expression of these serum miRNAs between 23 de novo PD cases and 23 MSA patients in order to analyze the clinical application value of the serum miRNAs in the diagnosis of PD and MSA.
The ethics committee approved the study of the Affiliated Brain Hospital of Nanjing Medical University, and it was completed based on the ethical standards established by the 1964 Declaration of Helsinki and its later amendments. All participants gave written informed consent.
PD Group: This group included 23 de novo PD outpatients from the Department of Neurology, Affiliated Brain Hospital, Nanjing Medical University. The incidence of PD was within 1 year, and patients did not take anti-PD drugs. All patients were followed for 2-3 years to confirm PD, and the diagnosis was in line with the British Brain Bank PD diagnostic criteria (Table 1).
MSA group: This group included 23 MSA outpatients from the Department of Neurology, Affiliated Brain Hospital, Nanjing Medical University. The duration of MSA was 1-3 years, and the diagnostic criteria were in line with the 1999 MSA diagnostic criteria proposed by Gilman (Gilman et al., 1998).
NC group: For this group, 24 physically healthy cases (with no serious chronic physical illness for the elderly patients) were from Affiliated Brain Hospital, Nanjing Medical University. Informed consent was obtained. No noticeable difference in sex or age between the PD group, MSA group, and control group was observed.
The data, history, and treatment of the 3 groups were obtained by means of history collection and assessment scales. All PD patients underwent the questionnaires and scales administered by 1-2 neurologists in 2 hours in a quiet environment.
Venous blood samples were collected from all controls and patients, and blood
was separated by centrifugation at a speed of 800
TRIzol reagent (Invitrogen, USA) was used to extract total RNA according to the
manufacturer’s instructions for qRT-PCR detection. The RNA was preserved at -80
TaqMan probe-based real-time PCRs were performed using a TaqMan miRNA PCR kit
(Applied Biosystems, USA). The expression of miRNAs (miR-30c, miR-31, miR-141,
miR-146b-5p, miR-181c, miR-214, and miR-193a-3p) were normalized to the level of
external reference (TIANGEN Biotech Co., Ltd., P. R. China). cDNA was synthesized
from the total RNA with the stem-loop RT primer (Applied Biosystems, USA) and AMV
reverse transcriptase (TaKaRa, P. R. China). A TaqMan miRNA probe was used to
perform real-time PCR on the Applied Biological System 7300 Sequence Detection
System (Applied Biosystems, USA). The relative miRNA expression levels were
calculated by the 2
Statistical analysis was performed with SPSS 18.0 software. Data were reported
as the means
Our preliminary results identified 7 differentially expressed miRNAs between
patients and controls (n = 93) (Dong et al., 2016). Our present study
enrolled 23 PD patients and 23 MSA patients. The quantitative real-time
polymerase chain reaction (qRT-PCR) results showed that of the 7 miRNAs (Table S1), the expression of miR-214 in serum was significantly higher compared with
the control group (P
Comparison of the expression levels of 7 miRNAs in
PD patients, MSA patients, and controls. (A) PD versus NC. (B) MSA versus NC.
(C) PD versus MSA. (D) The serum miR-214 level of 18 PD patients tended to
decrease with age. Data were reported as mean
The differences in miRNAs expression between 23 MSA patients and 24 healthy
controls indicated that the relative expression of 3 (miR-141, miR-193a-3p, and
miR-30c) of the 7 miRNAs was significantly lower in the MSA group than in the
control group (P
The differences in the expression of miRNAs between 23 PD patients and 23 MSA
patients demonstrated significant differences in the relative expression of 5
(miR-31, miR-141, miR-214, miR-181c, and miR-193a-3p) of the 7 miRNAs (P
The area expressed the diagnostic approach of the accuracy evaluation index under the ROC curve (AUC). Through the analysis and comparison of diagnostic tests for unified disease, these indicators can help identify the best diagnostic methods. Our results showed that the accuracy of AUC was moderate for all indexes to distinguish PD or MSA from the control group.
The ROC curve was used to analyze the sensitivity and specificity of serum miRNAs in the diagnosis and differential diagnosis of PD and MSA and to evaluate the clinical value of miRNAs. Sensitivity is the ordinate, and 1-specificity is the abscissa. (A) The ROC curves of miRNAs that were significantly dissimilar between the patient groups. The compared patient groups were shown in parentheses. The area under the curve (AUC) values ranged from 0.714 to 0.832. (B) The ROC curves of models created from the binary logistic regression to enhance the distinction between the groups. To differentiate MSA from NC, a model including miR-141, miR-193a-3p, and miR-30c was built and resulted in an AUC of 0.895. For the model of PD versus MSA, miR-31, miR-141, miR-181c, miR-193a-3p, and miR-214 were included, and it showed an AUC of 0.951.
A binary logistic regression analysis was
used to determine whether combinations of miRNAs could meliorate their usage as
biomarkers. Compared with a single miRNA, the
combination of miRNAs resulted in enhanced discrimination of the MSA from the
control group (Fig. 2B). The model
included miR-141, miR-193a-3p, and miR-30c.
The AUC increased to 0.895 (P
We used Spearman’s correlation analysis to estimate the correlation between miRNA expression in PD patients and the patient’s clinical information and found the following (Table S2): HAMD was negatively correlated with miR-31; HAMA was negatively correlated with all of the microRNAs except miR-193a-3p; PDNMS was negatively correlated with miR-214 and miR-30c; and UPDRS II was negatively correlated with miR-181c, miR-30c, and miR-193a-3p.
To further investigate the possible roles of 4 miRNAs in the development of PD and MSA, we used miRNA target prediction database sites, including TargetScan, miRanda, and PicTar, for the bioinformatics prediction analysis. The results show that some PD- and MSA-related genes are potential target genes for these 7 miRNAs (Table 2). Interestingly, some of these genes may be simultaneously regulated by 2 or more miRNAs in our study. Additionally, the miRNAs coregulate target genes of PD and MSA.
microRNA | Target genes linked to PD or MSA |
miR-31 | PARK2, GIGYF2 |
miR-141 | LRRK2, SNCA, PARK2 |
miR-214 | SNCA, GIGYF2, PRKAG2, UCHL1 |
miR-30c | LRRK2, GIGYF2, UCHL1, SQSTM1 |
miR-181c | LRRK2, PARK2, MAPT, PRKAG2 |
miR-146b-5p | PARK2, SLC1A4 |
miR-193a-3p | LRRK2, GIGYF2, SNCA |
SNCA synuclein alpha, PARK2 parkin E3 ubiquitin-protein ligase, GIGYF2 GRB10-interacting GYF protein 2, LRRK2 leucine-rich repeat kinase 2, PRKAG2 protein kinase AMP-activated gamma 2 noncatalytic subunit, UCHL1 ubiquitin-C-terminal hydrolase L1, SQSTM1 sequestosome 1, MAPT microtubule-associated protein tau, SLC1A4 solute carrier family 1 member 4. |
Neural miRNAs may be stably packaged in microvesicles and conveyed to blood and other peripheral biofluids (urine, saliva, breast milk) (Alexander et al., 2015; Cai et al., 2018; Haqqani et al., 2013; Moldovan et al., 2013; Valadi et al., 2007). Some miRNAs have similar changes in serum and brain tissue, suggesting that changes in serum miRNAs can be used to predict changes in miRNAs in the central nervous system (CNS). For example, miR-153 and miR-223 are significantly downregulated in both nerves and circulation (Cressatti et al., 2019). MiR-9 has also been reported to be decreased in both blood and brain tissue (Jin et al., 2013). Distinguishing PD from MSA by detecting the content and types of miRNAs in serum is of great significance. Previous studies have almost always used external parameters, and increasing evidence now exists that internal references are unstable in testing serum miRNAs. In contrast, we used a short-chain RNA that was not found in humans and animals and did not affect human serum as an external reference.
Our previous work confirmed that 7 miRNAs levels (miR-30c, miR-31, miR-141, miR-146b-5p, miR-214, miR-181c, and miR-193a-3p) in the serum of patients with PD were lower compared with the controls (Dong et al., 2016). Based on the achievements of the previous work, we designed a way to further test the expression levels of the 7 miRNAs in early PD, MSA, and control groups. The results showed that the levels of miR-214 in the serum of PD patients were distinctly higher than those in the serum of the healthy control group (Fig. 1A). These results are different from our previous results that the levels of miR-214 in the serum of PD patients were reduced compared with the normal controls (Dong et al., 2016). The reason may be that the patients in the previous study had a few years of onset (the average was 6 years), but the de novo patients in this study had less than 1 year of onset. The serum miRNA levels may change dynamically in patients with early-onset and late-onset. The miR-214 levels were upregulated at the beginning of PD. This may be due to the existence of compensation in the body. We speculate that the levels decreased again as patients became older and more ill (Fig. 1D). This result provides a clinical basis for miR-214 to become an early biomarker of PD.
MiR-214 was downregulated in the mesencephalon of PD mice and MPP
Other miRNAs in 7 miRNAs were also reported to have altered levels in autopsy brains of PD patients compared with controls. The decreased expression levels of miRNA-30 and miRNA-193 were verified in autopsy samples of PD patients (Briggs et al., 2015). MiR-181 was identified to be associated with PD from the brain and blood samples (Chatterjee and Roy, 2017). However, how these miRNAs change in MSA is still unknown. We further compared the expression differences of 7 serum miRNAs between MSA patients and healthy controls. The relative expression of 3 (miR-141, miR-193a-3p and miR-30c) of the 7 miRNAs were significantly different from the control group (Fig. 1B). By comparison, miR-141 was most important for identifying normal controls and MSA (Fig. 2A). The difference in the expression levels of 7 serum miRNAs between PD and MSA patients indicated that miR-31, miR-141, miR-181c, miR-193a-3p, and miR-214 were significantly lower in MSA than in PD (Fig. 1C). The specificity and sensitivity of these 5 miRNAs showed that they had diagnostic significance (Fig. 2B).
Our experiments further analyzed the correlations between these miRNAs expression levels and PD clinical scales. The results showed that the expression of miR-214 was negatively correlated with anxiety and PDNMS. The more severe the anxiety and nonmotor symptoms were, the lower the level of miR-214. In our study, we selected patients who did not take anti-PD drugs within 1 year of onset. Their H-Y stage and intelligence damage were relatively low. The increased level of miR-214 may be a compensatory response in the body at the beginning of the disease. With the increase of age, the miR-214 levels decreased gradually. The correlations between miRNA expression and clinical scales need to be further studied in an amplified sample size.
To date, 18 PD-related chromosomal sites have been reported, PARK1-PARK18. Some new genes have been proposed, such as GIGYF2(Park11), VPS35, and Pitx3 (Chen et al., 2013; Lautier et al., 2008; Liu et al., 2012). The genes related to MSA include SQSTM1 and SLC1A4. SNCA is a gene related to both MSA and PD.
Other groups have reported that miR-214 can target SNCA, a key protein of PD, and reduce its protein expression (Wang et al., 2015). Altered levels of miR-214 may affect SNCA protein levels and thus affect disease progression. For the MSA-related genes, SNCA was predicted to be the target gene of miR-141 (Table 2). In our work, miR-141 was the most important for identifying normal controls and MSA. These predictions have yet to be validated by more in vivo and in vitro experiments.
We have proved that miR-214 can be used as a molecular marker for PD diagnosis and its early diagnosis. Five microRNAs (miR-31, miR-141, miR-214, miR-181c, and miR-193a-3p) can be used for the antidiastole of PD and MSA.
Study conception, design, and supervision: WGL, HD, YH, and HC; history collection, assessment scales: PH and YC; sample collection: LTL, CYY, and LY; implementation of the experiment: JHY and PH; image drafting and revision: JHY; data analysis, statistical analysis: JHY and HD; manuscript writing: JHY; manuscript revising: HD, LWG, HZ, ZJZ, HZ, and QHY. All authors consented to the final version of this manuscript.
The ethics committee approved the study of the Affiliated Brain Hospital of Nanjing Medical University, and it was completed based on the ethical standards established by the 1964 Declaration of Helsinki and its later amendments. All participants provided informed consent.
Funding support from the National Key R&D Program of China [grant number 2017YFC1310300 and 2017YFC1310302]; the National Natural Science Fund [grant number 81571348]; the Jiangsu Natural Science Foundation [grant number BK20151077]; the National Key Research and Development Plan [grant number 2016YFC1306600]; the National Natural Science Fund [grant number 81701671]; and the Henan Province Key Research and Development and Promotion Special [grant number 182102310163] is greatly appreciated.
The authors declare no conflict of interest.